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| author | Yuri Victorovich <yuri@FreeBSD.org> | 2024-06-16 23:04:09 +0000 |
|---|---|---|
| committer | Yuri Victorovich <yuri@FreeBSD.org> | 2024-06-17 01:20:35 +0000 |
| commit | 324d0273f590995b10c92008d0dc4fa5889ea0a5 (patch) | |
| tree | f063c3c5888576c9bec034a1951eeb1c44903657 /biology | |
| parent | 28bd41f3cd17ce80bcec642d675f1ddbb3b42276 (diff) | |
| download | ports-324d0273f590995b10c92008d0dc4fa5889ea0a5.tar.gz ports-324d0273f590995b10c92008d0dc4fa5889ea0a5.zip | |
biology/py-gffutils: update 0.11.1 → 0.13
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/py-gffutils/Makefile | 10 | ||||
| -rw-r--r-- | biology/py-gffutils/distinfo | 6 |
2 files changed, 11 insertions, 5 deletions
diff --git a/biology/py-gffutils/Makefile b/biology/py-gffutils/Makefile index d7a3a74860a9..bf0a0a44ef14 100644 --- a/biology/py-gffutils/Makefile +++ b/biology/py-gffutils/Makefile @@ -1,5 +1,5 @@ PORTNAME= gffutils -DISTVERSION= 0.11.1 +DISTVERSION= 0.13 CATEGORIES= biology python MASTER_SITES= PYPI PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} @@ -17,8 +17,14 @@ RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}argcomplete>=1.9.4:devel/py-argcomplete@${PY ${PYTHON_PKGNAMEPREFIX}six>=1.12.0:devel/py-six@${PY_FLAVOR} USES= python -USE_PYTHON= distutils concurrent autoplist pytest # tests use nose and therefore don't work, see https://github.com/daler/gffutils/issues/211 +USE_PYTHON= distutils concurrent autoplist pytest + +TEST_ENV= ${MAKE_ENV} \ + PATH=${STAGEDIR}${PREFIX}/bin:${PATH} \ + PYTHONPATH=${STAGEDIR}${PYTHONPREFIX_SITELIBDIR} NO_ARCH= yes +# 1 test (test_roundtrip) fails, see test_roundtrip + .include <bsd.port.mk> diff --git a/biology/py-gffutils/distinfo b/biology/py-gffutils/distinfo index 87aef9733a5d..e5a11a3fb3cf 100644 --- a/biology/py-gffutils/distinfo +++ b/biology/py-gffutils/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1678604359 -SHA256 (gffutils-0.11.1.tar.gz) = ca7bf814d600b389bb2d5c403dd279755118cb1476c19c6f7aecb8c51a84263c -SIZE (gffutils-0.11.1.tar.gz) = 1553140 +TIMESTAMP = 1718571181 +SHA256 (gffutils-0.13.tar.gz) = b0d52f35c014cc0330fb5c4e3c6fea127c90ccf4c5384a825cdb5c8ff330d4eb +SIZE (gffutils-0.13.tar.gz) = 1560489 |