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authorJoseph Mingrone <jrm@FreeBSD.org>2023-12-23 17:15:10 +0000
committerJoseph Mingrone <jrm@FreeBSD.org>2023-12-23 17:28:25 +0000
commit3b90027c760a3591b2757fab96ab0e04298c62a9 (patch)
tree7fbc700de3f867be2147b8d50b2f81d8d13501eb /biology
parentb1486f1d55e8151b45c1c97c3207fd837df62877 (diff)
downloadports-3b90027c760a3591b2757fab96ab0e04298c62a9.tar.gz
ports-3b90027c760a3591b2757fab96ab0e04298c62a9.zip
biology/hyphy: Update to 2.5.58
Changes: https://github.com/veg/hyphy/releases/tag/2.5.58 Sponsored by: The FreeBSD Foundation
Diffstat (limited to 'biology')
-rw-r--r--biology/hyphy/Makefile2
-rw-r--r--biology/hyphy/distinfo6
-rw-r--r--biology/hyphy/pkg-plist2
3 files changed, 6 insertions, 4 deletions
diff --git a/biology/hyphy/Makefile b/biology/hyphy/Makefile
index ce766fc506a9..0f614818b254 100644
--- a/biology/hyphy/Makefile
+++ b/biology/hyphy/Makefile
@@ -1,5 +1,5 @@
PORTNAME= hyphy
-DISTVERSION= 2.5.57
+DISTVERSION= 2.5.58
CATEGORIES= biology
MAINTAINER= jrm@FreeBSD.org
diff --git a/biology/hyphy/distinfo b/biology/hyphy/distinfo
index c505ef07992a..53b75fc008b5 100644
--- a/biology/hyphy/distinfo
+++ b/biology/hyphy/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1699999920
-SHA256 (veg-hyphy-2.5.57_GH0.tar.gz) = 5412331ff40b58fa69f34ad67f3431e662e9c2002f5d035f47225f26b8e3533c
-SIZE (veg-hyphy-2.5.57_GH0.tar.gz) = 5583575
+TIMESTAMP = 1703351280
+SHA256 (veg-hyphy-2.5.58_GH0.tar.gz) = f448d4a95bdb356eb6b1384b0c507a79f152511ad76bb67170ab5b8eb2798231
+SIZE (veg-hyphy-2.5.58_GH0.tar.gz) = 5593070
diff --git a/biology/hyphy/pkg-plist b/biology/hyphy/pkg-plist
index 9f46ee3e53d6..3491aaa1b191 100644
--- a/biology/hyphy/pkg-plist
+++ b/biology/hyphy/pkg-plist
@@ -147,6 +147,7 @@ bin/hyphy
%%DATADIR%%/TemplateBatchFiles/ModelTest.bf
%%DATADIR%%/TemplateBatchFiles/MolClockAllRoots.bf
%%DATADIR%%/TemplateBatchFiles/MolecularClock.bf
+%%DATADIR%%/TemplateBatchFiles/MSS-joint-fitter.bf
%%DATADIR%%/TemplateBatchFiles/MSS-selector-2.bf
%%DATADIR%%/TemplateBatchFiles/MSS-selector.bf
%%DATADIR%%/TemplateBatchFiles/NeighborJoining.bf
@@ -191,6 +192,7 @@ bin/hyphy
%%DATADIR%%/TemplateBatchFiles/SelectionAnalyses/aBSREL.bf
%%DATADIR%%/TemplateBatchFiles/SelectionAnalyses/contrast-fel.bf
%%DATADIR%%/TemplateBatchFiles/SelectionAnalyses/contrast-meme.bf
+%%DATADIR%%/TemplateBatchFiles/SelectionAnalyses/error-filter.bf
%%DATADIR%%/TemplateBatchFiles/SelectionAnalyses/modules/grid_compute.ibf
%%DATADIR%%/TemplateBatchFiles/SelectionAnalyses/modules/io_functions.ibf
%%DATADIR%%/TemplateBatchFiles/SelectionAnalyses/modules/selection_lib.ibf