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| author | Yuri Victorovich <yuri@FreeBSD.org> | 2019-02-03 18:49:23 +0000 |
|---|---|---|
| committer | Yuri Victorovich <yuri@FreeBSD.org> | 2019-02-03 18:49:23 +0000 |
| commit | 540f58a8fb811325af8edf9d946247a32e47e686 (patch) | |
| tree | ea04f7ac8ae519ec632f0e56112e248517d9bf98 /biology | |
| parent | a1bcae4a2a9bf76d6db7d1a167afa8fd32711e40 (diff) | |
| download | ports-540f58a8fb811325af8edf9d946247a32e47e686.tar.gz ports-540f58a8fb811325af8edf9d946247a32e47e686.zip | |
New port: biology/prodigy-lig: Prediction of protein-small molecule binding affinities
Notes
Notes:
svn path=/head/; revision=492059
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/Makefile | 1 | ||||
| -rw-r--r-- | biology/prodigy-lig/Makefile | 25 | ||||
| -rw-r--r-- | biology/prodigy-lig/distinfo | 3 | ||||
| -rw-r--r-- | biology/prodigy-lig/pkg-descr | 5 |
4 files changed, 34 insertions, 0 deletions
diff --git a/biology/Makefile b/biology/Makefile index 75eb9e66c060..e4f76165635f 100644 --- a/biology/Makefile +++ b/biology/Makefile @@ -102,6 +102,7 @@ SUBDIR += plinkseq SUBDIR += primer3 SUBDIR += prodigal + SUBDIR += prodigy-lig SUBDIR += protomol SUBDIR += psi88 SUBDIR += py-Genesis-PyAPI diff --git a/biology/prodigy-lig/Makefile b/biology/prodigy-lig/Makefile new file mode 100644 index 000000000000..1eff3f7b5d7f --- /dev/null +++ b/biology/prodigy-lig/Makefile @@ -0,0 +1,25 @@ +# $FreeBSD$ + +PORTNAME= prodigy-lig +DISTVERSIONPREFIX= v +DISTVERSION= 1.0.0-3 +DISTVERSIONSUFFIX= -g152ac59 +CATEGORIES= biology python + +MAINTAINER= yuri@FreeBSD.org +COMMENT= Prediction of protein-small molecule binding affinities + +LICENSE= APACHE20 +LICENSE_FILE= ${WRKSRC}/LICENSE + +BUILD_DEPENDS= ${PYNUMPY} \ + ${PYTHON_PKGNAMEPREFIX}biopython>0:biology/py-biopython@${PY_FLAVOR} + +USES= gmake python:3.5+ +USE_GITHUB= yes +GH_ACCOUNT= haddocking +USE_PYTHON= distutils noflavors autoplist + +NO_ARCH= yes + +.include <bsd.port.mk> diff --git a/biology/prodigy-lig/distinfo b/biology/prodigy-lig/distinfo new file mode 100644 index 000000000000..92581ef368f5 --- /dev/null +++ b/biology/prodigy-lig/distinfo @@ -0,0 +1,3 @@ +TIMESTAMP = 1549219115 +SHA256 (haddocking-prodigy-lig-v1.0.0-3-g152ac59_GH0.tar.gz) = abf9e9e0baf2e91d306e3a297705f2c5a50149b145cdf64b990e25d9efa28731 +SIZE (haddocking-prodigy-lig-v1.0.0-3-g152ac59_GH0.tar.gz) = 155336 diff --git a/biology/prodigy-lig/pkg-descr b/biology/prodigy-lig/pkg-descr new file mode 100644 index 000000000000..e65cbf63ccb0 --- /dev/null +++ b/biology/prodigy-lig/pkg-descr @@ -0,0 +1,5 @@ +PRODIGY-LIG (PROtein binDIng enerGY prediction - LIGands) is a structure-based +method for the prediction of binding affinity in protein-small ligand (such as +drugs or metabolites) complexes. + +WWW: https://nestor.science.uu.nl/prodigy/lig |