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* devel/grpc: Update to 1.46.0Po-Chuan Hsieh2022-05-131-1/+1
* devel/libffi: Bump deps PORTREVISION for shlib changeKevin Bowling2022-05-091-0/+1
* biology/py-dna-features-viewer: Update to 3.1.1Jason W. Bacon2022-05-082-5/+4
* biology/checkm: Update 1.1.11 -> 1.2.0Yuri Victorovich2022-05-012-8/+8
* biology/py-mrcfile: New port: MRC file I/O library which is used in structura...Yuri Victorovich2022-05-014-0/+28
* biology/py-pysam: Update 0.18.0 -> 0.19.0Yuri Victorovich2022-04-272-4/+4
* biology/py-resdk: Update 14.0.0 -> 14.1.0Yuri Victorovich2022-04-272-4/+4
* biology/pooler: use openmp only when omp.h is presentPiotr Kubaj2022-04-271-5/+2
* biology/ncbi-blast+: check for omp.h on all architecturesPiotr Kubaj2022-04-271-4/+4
* biology/cd-hit: check for omp.h on all architecturesPiotr Kubaj2022-04-271-3/+1
* biology/hhsuite: check for omp.h on all architecturesPiotr Kubaj2022-04-271-6/+6
* biology/fasttree: check for omp.h on all architecturesPiotr Kubaj2022-04-271-5/+1
* biology/unikmer: Update 0.18.8 -> 0.19.0Yuri Victorovich2022-04-262-7/+6
* biology/checkm: Update 1.1.10 -> 1.1.11Yuri Victorovich2022-04-252-4/+4
* biology/seqan-apps: remove obsolete USE_GCCPiotr Kubaj2022-04-251-5/+1
* biology/hyphy: Update to 2.5.38Joseph Mingrone2022-04-245-231/+11
* biology/diamond: Update to 2.0.15Joseph Mingrone2022-04-242-4/+4
* biology/{,py-}libnuml: Update 1.1.5 -> 1.1.6Yuri Victorovich2022-04-245-10/+9
* biology/{,py-}libsedml: Update 2.0.30 -> 2.0.31Yuri Victorovich2022-04-225-10/+9
* biology/checkm: Update 1.1.9 -> 1.1.10Yuri Victorovich2022-04-222-4/+4
* biology/hhsuite: drop HAVE_POWER8 on powerpc64Piotr Kubaj2022-04-211-1/+2
* biology/py-scikit-bio: drop unnecessary USE_GCC on powerpc64Piotr Kubaj2022-04-211-4/+1
* biology/bolt-lmm: remove unnecessary CFLAGS_powerpc64Piotr Kubaj2022-04-211-1/+0
* biology/seqkit: Update 2.1.0 -> 2.2.0Yuri Victorovich2022-04-202-7/+6
* biology/py-scikit-bio: build with clang on powerpc64lePiotr Kubaj2022-04-191-1/+2
* biology/bolt-lmm: remove unnecessary flags for powerpc64lePiotr Kubaj2022-04-171-1/+0
* biology/checkm: Update 1.1.8 -> 1.1.9Yuri Victorovich2022-04-152-4/+4
* biology/py-scikit-bio: Update 0.5.6 -> 0.5.7Yuri Victorovich2022-04-152-7/+8
* biology/checkm: Update 1.0.18 -> 1.1.8Yuri Victorovich2022-04-123-656/+8
* biology/gatk: Update 4.2.0.0 -> 4.2.6.0Yuri Victorovich2022-04-102-8/+8
* textproc/libxml2: bump all LIB_DEPENDS consumersCharlie Li2022-04-105-3/+5
* biology/{,py-}libsedml: Update 2.0.28 -> 2.0.30Yuri Victorovich2022-04-075-10/+18
* biology/{,py-}libnuml: Update 1.1.4 -> 1.1.5Yuri Victorovich2022-04-076-20/+13
* biology/py-cutadapt: fix tests by adding missing test dependDmitry Marakasov2022-04-071-1/+2
* */*: fix trailing whitespace in pkg-descr'sDmitry Marakasov2022-04-011-1/+1
* devel/grpc: Update to 1.45.0Po-Chuan Hsieh2022-03-301-1/+1
* */*: Bump PORTREVISION after lang/go 1.18 updateGuangyuan Yang2022-03-304-1/+4
* textproc/libxml2: bump all dependenciesMatthias Fechner2022-03-265-1/+5
* biology/py-ont-fast5-api: Update to 4.0.2Jason W. Bacon2022-03-253-5/+16
* biology/python-nexus: Fix build with setuptools 58.0.0+Po-Chuan Hsieh2022-03-251-0/+19
* biology/py-crossmap: Fix build with setuptools 58.0.0+Po-Chuan Hsieh2022-03-251-0/+2955
* biology/groopm: Fix build with setuptools 58.0.0+Po-Chuan Hsieh2022-03-251-0/+3414
* biology/checkm: Fix build with setuptools 58.0.0+Po-Chuan Hsieh2022-03-252-1/+649
* biology/dsr-pdb: Remove -pg (mcount instrumentation) flagYuri Victorovich2022-03-222-2/+16
* biology/fastq-trim: Update to 0.1.1.4Jason W. Bacon2022-03-213-6/+6
* biology/fastq-trim: Update to 0.1.1.2Jason W. Bacon2022-03-214-7/+8
* biology/dsr-pdb: Broken on aarch64Yuri Victorovich2022-03-211-0/+2
* biology/biosig: Update 2.3.3 -> 2.4.0Yuri Victorovich2022-03-205-75/+5
* biology/bolt-lmm: Update to 2.3.6Jason W. Bacon2022-03-204-9/+30
* biology/fastq-trim: Lightening fast sequence read trimmerJason W. Bacon2022-03-195-0/+105
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