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* biology/htslib: fix build on armv7Robert Clausecker2023-04-183-0/+25
* biology/py-libsedml: Allow build with swig 4.1.0+Po-Chuan Hsieh2023-04-181-1/+12
* biology/py-libnuml: Allow build with swig 4.1.0+Po-Chuan Hsieh2023-04-181-1/+10
* biology/taxonkit: Update 0.14.1 → 0.14.2Yuri Victorovich2023-04-152-7/+6
* all: Bump PORTREVISION after lang/go{119,120} updateDmitri Goutnik2023-04-085-5/+5
* biology/libsbml: Update WWW and clean up pkg-descrPo-Chuan Hsieh2023-04-052-4/+3
* USE_PYTHON=pep517: bump PORTREVISIONAntoine Brodin2023-04-041-0/+1
* */*: Refactor java/openjdk7 removalMuhammad Moinur Rahman2023-04-042-2/+2
* biology/py-pybigwig: Update to 0.3.21Jason W. Bacon2023-04-012-4/+4
* */*: Sunset 12.3-RELEASE from ports tree12.3-eolMuhammad Moinur Rahman2023-03-301-10/+0
* biology/kmcp: fix build on i386 and riscv64Robert Clausecker2023-03-242-0/+20
* biology/hyphy: Update to 2.5.49Joseph Mingrone2023-03-242-5/+5
* biology/unikmer: fix build on riscv64Robert Clausecker2023-03-222-2/+10
* devel/grpc: Update to 1.52.1Po-Chuan Hsieh2023-03-211-1/+1
* biology/seqkit: fix build on riscv64Robert Clausecker2023-03-212-1/+10
* biology/py-scikit-bio: Update 0.5.7 → 0.5.8Yuri Victorovich2023-03-202-5/+5
* biology/py-scikit-bio: Update 0.5.7 → 0.5.7Yuri Victorovich2023-03-201-3/+9
* biology/py-pyrodigal: Update 2.0.3 → 2.1.0Yuri Victorovich2023-03-192-4/+4
* biology/diamond: Update to 2.1.6Joseph Mingrone2023-03-182-4/+4
* biology/seqkit: Update 2.3.1 → 2.4.0Yuri Victorovich2023-03-172-7/+6
* biology/py-dna-features-viewer: Update to 3.1.2Jason W. Bacon2023-03-172-4/+4
* biology/py-bcbio-gff: Update to 0.7.0Jason W. Bacon2023-03-162-4/+4
* biology/py-gtfparse: Update 1.2.1 → 1.3.0Yuri Victorovich2023-03-122-4/+4
* biology/py-gffutils: Update 0.11.0 → 0.11.1Yuri Victorovich2023-03-122-5/+5
* biology/ncbi-entrez-direct: fix build on riscv64Robert Clausecker2023-03-115-9/+60
* biology/py-biopython: Update to 1.81Wen Heping2023-03-092-4/+4
* all: Bump PORTREVISION after Go ports updateDmitri Goutnik2023-03-095-5/+5
* graphics/proj: Update to 9.2.0Loïc Bartoletti2023-03-091-1/+1
* PyQt: Update to latest versionsLoïc Bartoletti2023-03-091-1/+1
* biology/py-pybigwig: Update to 0.3.20Jason W. Bacon2023-03-082-4/+4
* biology/fastx-toolkit: Unbreak build on 14-CURRENTJason W. Bacon2023-03-073-1/+13
* biology/hyphy: Update to 2.5.48Joseph Mingrone2023-03-052-4/+4
* biology/diamond: Update to 2.1.4Joseph Mingrone2023-03-052-4/+4
* biology/fastqc: Update to 0.12.1Jason W. Bacon2023-03-053-5/+47
* accessibility/at-spi2-core: update to 2.46.0Tobias C. Berner2023-03-021-0/+1
* biology/bcf-score: Bcftools plugins for GWAS-VCF summary statisticsJason W. Bacon2023-02-257-0/+110
* biology/bcftools: Update to 1.17Jason W. Bacon2023-02-243-4/+5
* biology/samtools: Update to 1.17Jason W. Bacon2023-02-243-4/+6
* biology/htslib: Update to 1.17Jason W. Bacon2023-02-243-32/+13
* biology/diamond: Update to 2.1.3Joseph Mingrone2023-02-222-4/+4
* biology/diamond: Update to 2.1.2Joseph Mingrone2023-02-202-4/+4
* biology/igv: Update 2.9.4 → 2.16.0Yuri Victorovich2023-02-203-54/+66
* biology/atac-seq: Drop biology/igv depJason W. Bacon2023-02-191-2/+1
* biology/rna-seq: Drop biology/igv depJason W. Bacon2023-02-191-2/+1
* all: Bump PORTREVISION after lang/go{119,120} updateDmitri Goutnik2023-02-155-5/+5
* biology/diamond: Update to 2.1.1Joseph Mingrone2023-02-102-4/+4
* all: Bump PORTREVISION after GO_DEFAULT update.Dmitri Goutnik2023-02-095-4/+5
* biology/vcflib: Update to 1.0.7Jason W. Bacon2023-02-093-8/+21
* Revert "Mk/Uses/python.mk: Fix USE_PYTHON=pep517: always compile and install ...Charlie Li2023-02-051-1/+0
* Mk/Uses/python.mk: Fix USE_PYTHON=pep517: always compile and install bytecodePo-Chuan Hsieh2023-02-051-0/+1
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