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/
biology
Commit message (
Expand
)
Author
Age
Files
Lines
*
all: Bump PORTREVISION after lang/go{118,119} update
Dmitri Goutnik
2022-10-06
5
-3
/
+5
*
biology/py-valerius: New port: Python bioinformatics tools
Yuri Victorovich
2022-10-04
4
-0
/
+31
*
biology/rubygem-bio: Update to 2.0.4
Po-Chuan Hsieh
2022-10-03
2
-4
/
+4
*
devel/grpc: Update to 1.49.0
Po-Chuan Hsieh
2022-10-03
1
-1
/
+1
*
biology/hyphy: Not broken on systems where OpenMP isn't available
Yuri Victorovich
2022-10-01
1
-4
/
+0
*
biology/hyphy: Add tests; Fix ONLY_FOR_ARCHS order
Yuri Victorovich
2022-10-01
1
-2
/
+5
*
biology/hhsuite: Disable on 32-bit architectures following upstream advice
Yuri Victorovich
2022-10-01
1
-0
/
+2
*
biology/hhsuite: fix build on armv7
Robert Clausecker
2022-10-01
2
-2
/
+11
*
all: deprecate ports depending on expired security/py-keyrings.alt
Rene Ladan
2022-09-30
2
-0
/
+6
*
biology/py-PySCeS: Update 1.0.2 -> 1.0.3
Yuri Victorovich
2022-09-26
3
-26
/
+13
*
biology/seqkit: Update 2.3.0 -> 2.3.1
Yuri Victorovich
2022-09-25
2
-7
/
+6
*
biology/taxonkit: Update 0.12.0 -> 0.13.0
Yuri Victorovich
2022-09-25
2
-7
/
+6
*
biology/py-mrcfile: Update 1.4.2 -> 1.4.3
Yuri Victorovich
2022-09-24
2
-4
/
+4
*
biology/vsearch: Update to 2.22.1
Jason W. Bacon
2022-09-21
2
-4
/
+4
*
biology/hyphy: Update to 2.5.42
Joseph Mingrone
2022-09-19
2
-4
/
+4
*
biology/vsearch: Update to 2.21.2
Jason W. Bacon
2022-09-16
2
-4
/
+4
*
Mk/Uses: always use colon for build/run suffix
Felix Palmen
2022-09-11
2
-3
/
+3
*
biology/hhsuite: Broken on armv7
Yuri Victorovich
2022-09-09
1
-0
/
+2
*
*/*: Update path set in BUILD_DEPENDS for CMake
Daniel Engberg
2022-09-09
1
-1
/
+1
*
all: Bump PORTREVISION after lang/go{118,119} update
Dmitri Goutnik
2022-09-08
5
-3
/
+5
*
Remove WWW lines that have been moved into Makefiles
Stefan Eßer
2022-09-08
2
-4
/
+0
*
Move more WWW entries from pkg-descr files into Makefiles
Stefan Eßer
2022-09-08
2
-0
/
+2
*
Remove WWW entries moved into port Makefiles
Stefan Eßer
2022-09-07
226
-453
/
+3
*
Add WWW entries to port Makefiles
Stefan Eßer
2022-09-07
226
-0
/
+226
*
cleanup: remove trailing whitepaces
Tobias C. Berner
2022-09-07
1
-1
/
+1
*
biology/seqkit: Update 2.2.0 -> 2.3.0
Yuri Victorovich
2022-09-04
2
-7
/
+6
*
biology/phyml: Update to 3.3.20220408
Wen Heping
2022-09-02
2
-4
/
+4
*
biology/figtree: Update 1.4.4 -> 1.4.4-14
Yuri Victorovich
2022-08-28
2
-4
/
+7
*
biology/paml: Update to 4.10.5
Joseph Mingrone
2022-08-26
4
-41
/
+39
*
biology/kmcp: Update 0.8.3 -> 0.8.4
Yuri Victorovich
2022-08-18
2
-6
/
+6
*
biology/kmcp: Update 0.8.2 -> 0.8.3
Yuri Victorovich
2022-08-15
2
-120
/
+7
*
biology/kmcp: Broken on i386 and arm64
Yuri Victorovich
2022-08-15
1
-0
/
+3
*
*: bump PORTREVISION of all devel/xxhash users...
Matthias Andree
2022-08-13
1
-0
/
+1
*
*/*: bump all consumers after recent boost upgrade
Dima Panov
2022-08-12
11
-9
/
+11
*
biology/gatk: mark BROKEN
Dmitry Marakasov
2022-08-11
1
-0
/
+1
*
biology/kmcp: New port: Accurate metagenomic profiling & fast large-scale ge...
Yuri Victorovich
2022-08-07
4
-0
/
+140
*
biology/ncbi-cxx-toolkit: Broken on armv6
Yuri Victorovich
2022-08-06
1
-0
/
+2
*
biology/hyphy: Update 2.5.40 -> 2.5.41
Yuri Victorovich
2022-08-06
2
-5
/
+5
*
biology/py-ete3: Add tests
Yuri Victorovich
2022-08-06
1
-2
/
+3
*
biology/ugene: Correct BROKEN message
Yuri Victorovich
2022-08-04
1
-5
/
+3
*
biology/hyphy: Correct BROKEN message
Yuri Victorovich
2022-08-04
1
-1
/
+1
*
biology/hhsuite: Fix build on some architectures
Yuri Victorovich
2022-08-04
1
-0
/
+32
*
biology/hhsuite: Revert commit "Broken on systems where OpenMP isn't enabled"
Yuri Victorovich
2022-08-04
1
-4
/
+0
*
biology/ugene: Broken on systems where OpenMP isn't enabled
Yuri Victorovich
2022-08-04
1
-0
/
+3
*
biology/hhsuite: Broken on systems where OpenMP isn't enabled
Yuri Victorovich
2022-08-04
1
-0
/
+4
*
biology/hyphy: Broken on systems where OpenMP isn't enabled
Yuri Victorovich
2022-08-04
1
-0
/
+4
*
all: Bump PORTREVISION after Go update
Dmitri Goutnik
2022-08-03
4
-4
/
+4
*
biology/viennarna: Update 2.5.0 -> 2.5.1
Yuri Victorovich
2022-07-31
3
-6
/
+8
*
biology/abyss: Add test target
Yuri Victorovich
2022-07-30
1
-0
/
+2
*
devel/grpc: Update to 1.48.0
Po-Chuan Hsieh
2022-07-30
1
-1
/
+1
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