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* biology/unikmer: Update 0.18.0 -> 0.18.1Yuri Victorovich2021-06-242-6/+6
* biology/mmseqs2: Ultra fast and sensitive sequence search and clustering suiteJason W. Bacon2021-06-245-0/+94
* graphics/mesa-libs: Bump reverse deps for libglvndKevin Bowling2021-06-222-1/+2
* biostar-tools: Add sra-tools dependency to metaportJason W. Bacon2021-06-222-1/+2
* biology/sra-tools: NCBI's toolkit for handling data in INSDC Sequence Read Ar...Jason W. Bacon2021-06-2245-0/+2350
* biology/seqan-apps: fix packaging on armv7Piotr Kubaj2021-06-211-1/+1
* biology/seqan-apps: fix packaging on powerpcPiotr Kubaj2021-06-201-1/+1
* biology/vsearch: Update to 2.17.1Jason W. Bacon2021-06-192-6/+5
* biology/biostar-tools: Meta-port for Biostar Handbook toolsJason W. Bacon2021-06-186-0/+126
* math/gsl: update to 2.7Tobias C. Berner2021-06-163-0/+3
* biology/fasttree: fix build on armv7Piotr Kubaj2021-06-151-2/+1
* biology/peak-classifier: Classify peaks based on GFF featuresJason W. Bacon2021-06-145-0/+45
* math/lapack: +math/blas et al., upgrade to 3.9.1Thierry Thomas2021-06-132-1/+13
* biology/vcf2hap: Remove comment used to silence portlintJason W. Bacon2021-06-111-2/+0
* biology/ad2vcf: Remove comment used to silence portlintJason W. Bacon2021-06-111-2/+0
* biology/biolibc: Remove comment used to silence portlintJason W. Bacon2021-06-111-2/+0
* biology/vcf-split: Update to 0.1.2Jason W. Bacon2021-06-112-5/+5
* biology/vcf2hap: Update to 0.1.3Jason W. Bacon2021-06-113-7/+11
* biology/ad2vcf: Update to 0.1.3Jason W. Bacon2021-06-113-9/+9
* biology/biolibc: Update to 0.1.3Jason W. Bacon2021-06-113-9/+42
* biology/fasttree: fix build on powerpcPiotr Kubaj2021-06-101-0/+6
* biology/cd-hit: fix build on powerpcPiotr Kubaj2021-06-101-0/+6
* biology/hyphy: Update to 2.5.31Joseph Mingrone2021-06-053-4/+31
* biology/jalview: Broken on 11Yuri Victorovich2021-06-052-4/+3
* biology/seqan3: Update 3.0.2-1195 -> 3.0.3Yuri Victorovich2021-05-303-7/+16
* biology/minimap2: Update to 2.20Jason W. Bacon2021-05-293-14/+30
* biology/taxonkit: New port: Practical and efficient NCBI taxonomy toolkitYuri Victorovich2021-05-264-0/+35
* biology/unikmer: New port: Toolkit for nucleic acid k-mer analysis, set opera...Yuri Victorovich2021-05-264-0/+37
* biology/bowtie2: Update to 2.4.4Jason W. Bacon2021-05-242-4/+4
* biology/py-resdk: Update 13.2.0 -> 13.3.0Yuri Victorovich2021-05-242-4/+4
* biology/seqkit: Update 0.16.0 -> 0.16.1Yuri Victorovich2021-05-202-6/+6
* biology/iolib: Drop maintainershipDanilo Egea Gondolfo2021-05-191-1/+1
* - Update Unipro UGENE to version 38.1 and thus unbreakAlexey Dokuchaev2021-05-182-8/+6
* biology/bowtie2: Update to 2.4.3Jason W. Bacon2021-05-173-43/+26
* biology/ucsc-userapps: Update to v414Jason W. Bacon2021-05-153-11/+13
* *: Remove unnecessary 'port' argument from USES=readlineYasuhiro Kimura2021-05-151-1/+1
* biology/cytoscape: mark unconditionally BROKENDmitry Marakasov2021-05-121-3/+1
* biology/ugene: mark BROKEN (does not fetch)Dmitry Marakasov2021-05-121-0/+1
* biology/seqan3: Correct dependenciesYuri Victorovich2021-05-121-3/+3
* biology/seqan3: Add dependency math/lemonYuri Victorovich2021-05-121-0/+2
* New port: biology/seqan3: C++ header-only library for biological sequence ana...Yuri Victorovich2021-05-125-0/+716
* biology/libsbml: Rename LIBXML option to LIBXML2Po-Chuan Hsieh2021-05-111-6/+5
* math/py-matplotlib: chase minimum Python version in dependent portsThierry Thomas2021-05-103-3/+3
* biology/mothur: Update 1.45.2 -> 1.45.3Yuri Victorovich2021-05-092-4/+4
* Deorbit RESTRICTED && NO_CDROM, part two.Mathieu Arnold2021-05-063-3/+18
* Deorbit RESTRICTED && NO_CDROM, part one.Mathieu Arnold2021-05-064-9/+4
* biology/py-resdk: Update 13.1.0 -> 13.2.0Yuri Victorovich2021-05-052-4/+6
* biology/py-cutadapt: Update strict py-dnaio dep versionJason W. Bacon2021-05-041-1/+2
* biology/py-dnaio: Update to 0.5.1Jason W. Bacon2021-05-043-7/+7
* Clean up some thingsTobias Kortkamp2021-05-011-2/+0
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