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biology
Commit message (
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Author
Age
Files
Lines
*
biology/viennarna: Update 2.4.18 -> 2.5.0
Yuri Victorovich
2022-01-25
3
-6
/
+10
*
biology/vsearch: Update to 2.21.1
Jason W. Bacon
2022-01-23
2
-4
/
+4
*
cleanup: remove transitive py27 deprecation (www/qt5-webengine)
Rene Ladan
2022-01-23
2
-6
/
+0
*
biology/ncbi-blast+: fix build on powerpc
Piotr Kubaj
2022-01-22
1
-0
/
+4
*
biology/mothur: Update 1.46.1 -> 1.47.0
Yuri Victorovich
2022-01-21
2
-5
/
+5
*
biology/fastp: Add USE_GCC to hack around seg faults
Jason W. Bacon
2022-01-21
1
-1
/
+3
*
biology/bowtie2: Update to 2.4.5
Jason W. Bacon
2022-01-21
2
-4
/
+6
*
biology/py-resdk: Update 13.8.0 -> 14.0.0
Yuri Victorovich
2022-01-19
2
-4
/
+4
*
biology/kallisto: Update to 0.48.0
Jason W. Bacon
2022-01-19
7
-27
/
+97
*
*: Clean up some things
Tobias Kortkamp
2022-01-17
1
-1
/
+1
*
biology/bio-mocha: Update to 1.14-20220112
Jason W. Bacon
2022-01-13
5
-507
/
+8
*
biology/diamond: Update to 2.0.14
Joseph Mingrone
2022-01-13
2
-4
/
+4
*
math/gsl: bump portrevision of consumers after update to 2.7.1
Tobias C. Berner
2022-01-12
3
-2
/
+3
*
biology/rubygem-bio: Update to 2.0.3
Po-Chuan Hsieh
2022-01-11
2
-4
/
+4
*
textproc/py-sphinx: Update to 4.3.1
Danilo G. Baio
2022-01-11
1
-0
/
+10
*
Fix CONFLICTS entries of multiple ports
Stefan Eßer
2022-01-10
12
-0
/
+24
*
biology/vsearch: Update to 2.19.0
Jason W. Bacon
2022-01-08
4
-38
/
+7
*
biology/molden: update to 6.7
Johannes M Dieterich
2022-01-05
6
-890
/
+48
*
biology/phyml: update to 3.3.20211231
Fernando Apesteguía
2022-01-02
7
-87
/
+12
*
biology/minimap2: Update to 2.24
Jason W. Bacon
2021-12-31
2
-5
/
+4
*
biology/fastp: Update to 0.23.2
Jason W. Bacon
2021-12-30
2
-4
/
+4
*
biology/py-resdk: Update 13.7.0 -> 13.8.0
Yuri Victorovich
2021-12-30
2
-4
/
+4
*
devel/grpc: Update to 1.42.0
Po-Chuan Hsieh
2021-12-21
1
-1
/
+1
*
bio-mocha: Build plugin against bcftools 1.14, the current port
Jason W. Bacon
2021-12-21
2
-5
/
+7
*
biology/py-bx-python: Update 0.8.11-6 -> 0.8.13
Yuri Victorovich
2021-12-21
2
-10
/
+5
*
biology/canu: fix CATEGORIES
Antoine Brodin
2021-12-20
1
-1
/
+1
*
biology/py-pysam: Update 0.16.0.1 -> 0.18.0
Wen Heping
2021-12-20
2
-4
/
+4
*
biology/canu: Update to 2.2
Jason W. Bacon
2021-12-19
11
-13
/
+204
*
biology/seqtk: Update to 1.3
Jason W. Bacon
2021-12-18
3
-17
/
+29
*
biology/bcftools: Update to 1.14
Jason W. Bacon
2021-12-18
2
-4
/
+4
*
biology/samtools: Update to 1.14
Jason W. Bacon
2021-12-18
3
-4
/
+5
*
biology/htslib: Update to 1.14
Jason W. Bacon
2021-12-18
2
-4
/
+4
*
biology/freebayes: enable on riscv64
Piotr Kubaj
2021-12-17
1
-1
/
+0
*
biology/vcflib: unbreak on riscv64
Piotr Kubaj
2021-12-16
1
-3
/
+0
*
biology/hisat2: enable on riscv64
Piotr Kubaj
2021-12-16
1
-1
/
+1
*
biology/bowtie: enable on riscv64
Piotr Kubaj
2021-12-15
1
-2
/
+2
*
biology/vcf2hap: Update to 0.1.4
Jason W. Bacon
2021-12-14
2
-5
/
+5
*
biology/vcf-split: Update to 0.1.3.3
Jason W. Bacon
2021-12-14
2
-5
/
+6
*
biology/peak-classifier: Update to 0.1.2
Jason W. Bacon
2021-12-14
2
-5
/
+4
*
biology/biolibc-tools: Update to 0.1.1
Jason W. Bacon
2021-12-14
3
-12
/
+25
*
biology/ad2vcf: Update to 0.1.4
Jason W. Bacon
2021-12-14
2
-5
/
+5
*
biology/biolibc: Update to 0.2.1
Jason W. Bacon
2021-12-14
3
-183
/
+8
*
biology/bowtie: Update to 1.3.1
Jason W. Bacon
2021-12-14
6
-80
/
+34
*
devel/automake: update to 1.16.5
Tijl Coosemans
2021-12-12
2
-2
/
+29
*
biology/seaview: Update version 5.0.4=>5.0.5
Muhammad Moinur Rahman
2021-12-06
3
-77
/
+4
*
biology/libgff: GFF/GTF parsing library based on GCLib
Jason W. Bacon
2021-12-05
5
-0
/
+45
*
biology/minimap2: Unbreak on i386 by resotring -msse flags
Jason W. Bacon
2021-12-03
2
-18
/
+3
*
biology/bio-mocha: bcftools plugin for mosaic chromosomal alterations
Jason W. Bacon
2021-12-03
9
-0
/
+613
*
biology/taxonkit: Update 0.8.0 -> 0.9.0
Yuri Victorovich
2021-12-02
2
-6
/
+6
*
biology/bwa: don't use GCC on powerpc64le
Piotr Kubaj
2021-12-01
1
-3
/
+0
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