aboutsummaryrefslogtreecommitdiff
path: root/biology
Commit message (Expand)AuthorAgeFilesLines
* math/suitesparse*: bump PORTREVISION of dependant portsThierry Thomas2023-01-192-0/+2
* graphics/proj: Update to 9.1.1Loïc Bartoletti2023-01-181-1/+1
* biology/libsbml: unbreak build after 18c6e1827669 (+)Dima Panov2023-01-181-1/+1
* */*: bump libboost*.so libraries consumert after Boost upgradeDima Panov2023-01-164-4/+4
* Mk/**ruby.mk: Switch from USE_RUBY=yes to USES=rubyMuhammad Moinur Rahman2023-01-145-7/+1
* all: Bump PORTVERSION after lang/go{118,119} updateDmitri Goutnik2023-01-145-3/+5
* biology/rna-seq: Update to 0.1.1Jason W. Bacon2023-01-122-4/+5
* biology/atac-seq: Update to 0.1.1Jason W. Bacon2023-01-122-4/+5
* biology/atac-seq: Metaport for ATAC-Seq analysisJason W. Bacon2023-01-114-0/+31
* */*: rename CHEESESHOP to PYPI in MASTER_SITESDmitry Marakasov2023-01-1134-34/+34
* biology/hyphy: Update to upstream tag 2.5.46hf1Joseph Mingrone2023-01-103-55/+6
* biology/vcflib: Bump PORTREVISION for biology/htslib updateJason W. Bacon2023-01-061-0/+1
* biology/tabixpp: Bump PORTREVISION for biology/htslib updateJason W. Bacon2023-01-061-1/+1
* biology/star: Bump PORTREVISION for biology/htslib updateJason W. Bacon2023-01-061-0/+1
* biology/pbbam: Bump PORTREVISION for biology/htslib updateJason W. Bacon2023-01-061-1/+1
* biology/jellyfish: Bump PORTREVISION for biology/htslib updateJason W. Bacon2023-01-061-1/+1
* biology/freebayes: Bump PORTREVISION for biology/htslib updateJason W. Bacon2023-01-061-0/+1
* biology/vt: Bump PORTREVISION for biology/htslib updateJason W. Bacon2023-01-061-1/+1
* biology/bio-mocha: Update to 1.16Jason W. Bacon2023-01-053-13/+9
* biology/bcftools: Update to 1.16Jason W. Bacon2023-01-053-4/+5
* biology/samtools: Update to 1.16.1Jason W. Bacon2023-01-053-4/+5
* biology/htslib: Update to 1.16Jason W. Bacon2023-01-052-4/+4
* biology/lamarc: Refactor after wxgtk28 removalMuhammad Moinur Rahman2022-12-311-7/+7
* biology/py-biosig: New port: Library for reading and writing different biosig...Yuri Victorovich2022-12-304-0/+36
* biology/biosig: Update 2.4.3 -> 2.5.0Yuri Victorovich2022-12-303-5/+53
* biology/taxonkit: Update 0.14.0 -> 0.14.1Yuri Victorovich2022-12-272-7/+6
* biology/unikmer: Update 0.19.0 -> 0.19.1Yuri Victorovich2022-12-272-7/+6
* biology/hyphy: Update to 2.5.43Joseph Mingrone2022-12-262-4/+4
* biology/py-pyrodigal: Update 2.0.2 -> 2.0.3Yuri Victorovich2022-12-222-5/+5
* biology/snpeff: Update to 5.1Jason W. Bacon2022-12-192-4/+4
* biology/pooler: update to 1.86Silas S. Brown2022-12-192-4/+5
* biology/biolibc-tools: Update to 0.1.4.1Jason W. Bacon2022-12-142-4/+5
* biology/biolibc-tools: Update to 0.1.4Jason W. Bacon2022-12-133-5/+6
* biology/rna-seq: Metaport for RNA-Seq analysisJason W. Bacon2022-12-124-0/+30
* biology/fasda: Fast and simple differential analysisJason W. Bacon2022-12-125-0/+44
* biology/fastq-trim: Update to 0.1.2Jason W. Bacon2022-12-113-7/+10
* biology/vcf-split: Update to 0.1.5-4Jason W. Bacon2022-12-112-4/+5
* biology/peak-classifier: Update to 0.1.4-5Jason W. Bacon2022-12-113-5/+5
* biology/biolibc: Update to 0.2.4Jason W. Bacon2022-12-112-4/+4
* all: Bump PORTREVISION after lang/go{118,119} updateDmitri Goutnik2022-12-115-4/+5
* biology/cytoscape: Broken on armv6, armv7Yuri Victorovich2022-12-111-0/+3
* biology/metaeuk: Fix build on systems withour OpenMP enabledYuri Victorovich2022-12-101-4/+4
* biology/libcombine: Update 0.2.19 -> 0.2.20Yuri Victorovich2022-12-083-10/+10
* biology/py-pyrodigal: New port: Python binding for Prodigal, an ORF finder fo...Yuri Victorovich2022-12-064-0/+50
* Revert: "all: deprecate ports depending on expired security/py-keyrings.alt"Rene Ladan2022-12-062-6/+0
* biology/py-biopython: Update to 1.80Wen Heping2022-12-052-5/+5
* biology/metaeuk: Broken on systems where OpenMP isn't enabledYuri Victorovich2022-12-031-0/+4
* biology/metaeuk: append missing bracketPiotr Kubaj2022-12-011-1/+1
* biology/metaeuk: fix build without libomp and disable -m{arch,cpu}=nativePiotr Kubaj2022-12-011-0/+7
* biology/taxonkit: Update 0.13.0 -> 0.14.0Yuri Victorovich2022-11-292-7/+6