index
:
ports
2014Q1
2014Q2
2014Q3
2014Q4
2015Q1
2015Q2
2015Q3
2015Q4
2016Q1
2016Q2
2016Q3
2016Q4
2017Q1
2017Q2
2017Q3
2017Q4
2018Q1
2018Q2
2018Q3
2018Q4
2019Q1
2019Q2
2019Q3
2019Q4
2020Q1
2020Q2
2020Q3
2020Q4
2021Q1
2021Q2
2021Q3
2021Q4
2022Q1
2022Q2
2022Q3
2022Q4
2023Q1
2023Q2
2023Q3
2023Q4
2024Q1
2024Q2
2024Q3
2024Q4
main
FreeBSD ports tree
about
summary
refs
log
tree
commit
diff
log msg
author
committer
range
path:
root
/
biology
Commit message (
Expand
)
Author
Age
Files
Lines
*
*/*: chase the upgrade of CHOLMOD
Thierry Thomas
2023-10-20
1
-1
/
+1
*
biology/bowtie2: Update to 2.5.2
Jason W. Bacon
2023-10-18
2
-5
/
+6
*
biology/gcta: Add temporary hack for building on aarch64
Jason W. Bacon
2023-10-15
1
-1
/
+12
*
*/*: chase the upgrade of SuiteSparse
Thierry Thomas
2023-10-15
2
-2
/
+2
*
biology/gcta: Update to 1.94.1
Jason W. Bacon
2023-10-14
14
-200
/
+218
*
biology/mashmap: disable on powerpc
Piotr Kubaj
2023-10-11
1
-0
/
+1
*
biology/p5-BioPerl: Update to 1.007008
Po-Chuan Hsieh
2023-10-11
3
-11
/
+8
*
biology/bifrost: Update to 1.3.0
Jason W. Bacon
2023-10-11
3
-6
/
+5
*
biology/py-pysam: update 0.21.0 → 0.22.0
Yuri Victorovich
2023-10-06
2
-4
/
+4
*
biology/rubygem-bio: Update to 2.0.5
Po-Chuan Hsieh
2023-09-30
2
-4
/
+4
*
biology/libsbml: Update to 5.20.2
Po-Chuan Hsieh
2023-09-30
2
-4
/
+4
*
biology/wfa2-lib: Update to 2.3.4
Jason W. Bacon
2023-09-29
5
-7
/
+24
*
biology/mothur: Remove CC/CPP/CXX exports
Muhammad Moinur Rahman
2023-09-28
1
-3
/
+0
*
devel/boost*: bump all consumers after 1.83.0
Dima Panov
2023-09-27
4
-4
/
+4
*
/*: bump PORTREVISION after the upgrade of SuiteSparse
Thierry Thomas
2023-09-20
2
-1
/
+2
*
biology/kmcp: update 0.9.3 → 0.9.4
Yuri Victorovich
2023-09-18
2
-7
/
+6
*
biology/seqan3: update 3.2.0 → 3.3.0
Yuri Victorovich
2023-09-10
3
-23
/
+35
*
biology/pooler: Update to 1.88
Jason W. Bacon
2023-09-10
2
-4
/
+4
*
all: Bump PORTREVISION after lang/go* update
Dmitri Goutnik
2023-09-08
5
-3
/
+5
*
biology/peak-classifier: Clean up USES=python
Po-Chuan Hsieh
2023-09-06
1
-1
/
+1
*
biology/hyphy: Update to 2.5.53
Joseph Mingrone
2023-09-05
2
-4
/
+4
*
biology/iqtree: Update to 2.2.2.7
Joseph Mingrone
2023-09-05
3
-14
/
+16
*
biology/spoa: update 4.0.7 → 4.1.0
Yuri Victorovich
2023-08-29
4
-128
/
+21
*
biology/bioparser: update 3.0.15 → 3.1.0
Yuri Victorovich
2023-08-29
2
-4
/
+6
*
biology/biosoup: Install cmake files
Yuri Victorovich
2023-08-29
2
-6
/
+7
*
biology/py-resdk: update 19.0.0 → 19.0.1
Yuri Victorovich
2023-08-28
2
-4
/
+4
*
biology/ncbi-blast+: Update to 2.14.1
Jason W. Bacon
2023-08-26
3
-6
/
+19
*
biology/seqwish: Add comment
Yuri Victorovich
2023-08-25
1
-0
/
+2
*
biology/py-resdk: update 18.0.0 → 19.0.0
Yuri Victorovich
2023-08-25
2
-4
/
+4
*
biology/taxonkit: Update 0.14.2 → 0.15.0
Yuri Victorovich
2023-08-22
2
-7
/
+6
*
biology/mashmap: Update 3.1.0 → 3.1.1
Yuri Victorovich
2023-08-22
2
-4
/
+4
*
biology/mashmap: Update 3.0.6 → 3.1.0
Yuri Victorovich
2023-08-22
2
-6
/
+6
*
biology/star: Fix SIMD issue on non-amd64
Jason W. Bacon
2023-08-21
2
-12
/
+9
*
devel/onetbb: Update to 2021.10.0
Ganael LAPLANCHE
2023-08-21
1
-0
/
+1
*
biology/star: fix build on !amd64
Piotr Kubaj
2023-08-19
1
-0
/
+6
*
biology/viennarna: Mark BROKEN on 14
Muhammad Moinur Rahman
2023-08-18
1
-0
/
+2
*
biology/lamarc: Mark BROKEN on 14
Muhammad Moinur Rahman
2023-08-18
1
-0
/
+2
*
biology/mothur: Fix build on 14
Muhammad Moinur Rahman
2023-08-18
1
-1
/
+10
*
biology/star: Update to 2.7.11a
Jason W. Bacon
2023-08-17
4
-27
/
+7
*
biology/seqwish: Broken on i386
Yuri Victorovich
2023-08-17
1
-0
/
+2
*
biology/mothur: Fix build with clang-16
Yuri Victorovich
2023-08-15
1
-0
/
+1
*
biology/bifrost: Control -march via CPUTYPE make variable
Jason W. Bacon
2023-08-12
2
-10
/
+12
*
biology/cd-hit: allow to build without GCC on libomp-less systems
Piotr Kubaj
2023-08-12
1
-4
/
+4
*
biology/peak-classifier: Update to 0.1.4.11
Jason W. Bacon
2023-08-11
2
-6
/
+6
*
biology/biolibc-tools: Update to 0.1.4.9
Jason W. Bacon
2023-08-11
3
-7
/
+7
*
biology/fasda: Update to 0.1.4
Jason W. Bacon
2023-08-11
2
-4
/
+5
*
biology/biolibc: Update to 0.2.5
Jason W. Bacon
2023-08-11
3
-68
/
+67
*
biology/sra-tools: Update to 3.0.6
Jason W. Bacon
2023-08-10
69
-2226
/
+898
*
biology/hyphy: Update to 2.5.52
Joseph Mingrone
2023-08-09
4
-19
/
+6
*
biology/seqkit: Update 2.5.0 → 2.5.1
Yuri Victorovich
2023-08-09
2
-9
/
+8
[next]